Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM44855.1 | SHM93509.1 | SAMN05660971_03002 | SAMN05660971_04310 | Acyl transferase domain-containing protein. | Hypothetical protein. | 0.926 |
SHM44855.1 | SHM93539.1 | SAMN05660971_03002 | SAMN05660971_04311 | Acyl transferase domain-containing protein. | Enoyl-CoA hydratase/carnithine racemase. | 0.940 |
SHM44855.1 | SHM93590.1 | SAMN05660971_03002 | SAMN05660971_04313 | Acyl transferase domain-containing protein. | glutaryl-CoA dehydrogenase. | 0.926 |
SHM44855.1 | SHM93614.1 | SAMN05660971_03002 | SAMN05660971_04314 | Acyl transferase domain-containing protein. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.699 |
SHM44855.1 | sucC | SAMN05660971_03002 | SAMN05660971_04184 | Acyl transferase domain-containing protein. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.930 |
SHM44855.1 | sucD | SAMN05660971_03002 | SAMN05660971_04183 | Acyl transferase domain-containing protein. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.663 |
SHM93509.1 | SHM44855.1 | SAMN05660971_04310 | SAMN05660971_03002 | Hypothetical protein. | Acyl transferase domain-containing protein. | 0.926 |
SHM93509.1 | SHM93539.1 | SAMN05660971_04310 | SAMN05660971_04311 | Hypothetical protein. | Enoyl-CoA hydratase/carnithine racemase. | 0.965 |
SHM93509.1 | SHM93559.1 | SAMN05660971_04310 | SAMN05660971_04312 | Hypothetical protein. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.866 |
SHM93509.1 | SHM93590.1 | SAMN05660971_04310 | SAMN05660971_04313 | Hypothetical protein. | glutaryl-CoA dehydrogenase. | 0.600 |
SHM93509.1 | SHM93614.1 | SAMN05660971_04310 | SAMN05660971_04314 | Hypothetical protein. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.408 |
SHM93539.1 | SHM44855.1 | SAMN05660971_04311 | SAMN05660971_03002 | Enoyl-CoA hydratase/carnithine racemase. | Acyl transferase domain-containing protein. | 0.940 |
SHM93539.1 | SHM93509.1 | SAMN05660971_04311 | SAMN05660971_04310 | Enoyl-CoA hydratase/carnithine racemase. | Hypothetical protein. | 0.965 |
SHM93539.1 | SHM93559.1 | SAMN05660971_04311 | SAMN05660971_04312 | Enoyl-CoA hydratase/carnithine racemase. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.976 |
SHM93539.1 | SHM93590.1 | SAMN05660971_04311 | SAMN05660971_04313 | Enoyl-CoA hydratase/carnithine racemase. | glutaryl-CoA dehydrogenase. | 0.881 |
SHM93539.1 | SHM93614.1 | SAMN05660971_04311 | SAMN05660971_04314 | Enoyl-CoA hydratase/carnithine racemase. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.426 |
SHM93559.1 | SHM93509.1 | SAMN05660971_04312 | SAMN05660971_04310 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Hypothetical protein. | 0.866 |
SHM93559.1 | SHM93539.1 | SAMN05660971_04312 | SAMN05660971_04311 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Enoyl-CoA hydratase/carnithine racemase. | 0.976 |
SHM93559.1 | SHM93590.1 | SAMN05660971_04312 | SAMN05660971_04313 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | glutaryl-CoA dehydrogenase. | 0.729 |
SHM93559.1 | SHM93614.1 | SAMN05660971_04312 | SAMN05660971_04314 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.436 |
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