Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL46385.1 | SHM94838.1 | SAMN05660971_00649 | SAMN05660971_04352 | cation:H+ antiporter. | Small conductance mechanosensitive channel. | 0.521 |
SHM27641.1 | SHM46662.1 | SAMN05660971_02635 | SAMN05660971_03062 | PAS domain S-box-containing protein. | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.501 |
SHM27641.1 | SHM46688.1 | SAMN05660971_02635 | SAMN05660971_03063 | PAS domain S-box-containing protein. | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.501 |
SHM27641.1 | SHM94838.1 | SAMN05660971_02635 | SAMN05660971_04352 | PAS domain S-box-containing protein. | Small conductance mechanosensitive channel. | 0.407 |
SHM27641.1 | gcvP | SAMN05660971_02635 | SAMN05660971_00758 | PAS domain S-box-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.608 |
SHM46662.1 | SHM27641.1 | SAMN05660971_03062 | SAMN05660971_02635 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | PAS domain S-box-containing protein. | 0.501 |
SHM46662.1 | SHM46688.1 | SAMN05660971_03062 | SAMN05660971_03063 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.731 |
SHM46662.1 | SHM94838.1 | SAMN05660971_03062 | SAMN05660971_04352 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Small conductance mechanosensitive channel. | 0.429 |
SHM46662.1 | rimK | SAMN05660971_03062 | SAMN05660971_03823 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | SSU ribosomal protein S6P modification protein; Belongs to the RimK family. | 0.414 |
SHM46688.1 | SHM27641.1 | SAMN05660971_03063 | SAMN05660971_02635 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | PAS domain S-box-containing protein. | 0.501 |
SHM46688.1 | SHM46662.1 | SAMN05660971_03063 | SAMN05660971_03062 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.731 |
SHM46688.1 | SHM94838.1 | SAMN05660971_03063 | SAMN05660971_04352 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Small conductance mechanosensitive channel. | 0.429 |
SHM46688.1 | rimK | SAMN05660971_03063 | SAMN05660971_03823 | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | SSU ribosomal protein S6P modification protein; Belongs to the RimK family. | 0.414 |
SHM94838.1 | SHL46385.1 | SAMN05660971_04352 | SAMN05660971_00649 | Small conductance mechanosensitive channel. | cation:H+ antiporter. | 0.521 |
SHM94838.1 | SHM27641.1 | SAMN05660971_04352 | SAMN05660971_02635 | Small conductance mechanosensitive channel. | PAS domain S-box-containing protein. | 0.407 |
SHM94838.1 | SHM46662.1 | SAMN05660971_04352 | SAMN05660971_03062 | Small conductance mechanosensitive channel. | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.429 |
SHM94838.1 | SHM46688.1 | SAMN05660971_04352 | SAMN05660971_03063 | Small conductance mechanosensitive channel. | Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.429 |
SHM94838.1 | SHM94856.1 | SAMN05660971_04352 | SAMN05660971_04353 | Small conductance mechanosensitive channel. | Putative endonuclease. | 0.756 |
SHM94838.1 | SHM94874.1 | SAMN05660971_04352 | SAMN05660971_04354 | Small conductance mechanosensitive channel. | Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.609 |
SHM94838.1 | gcvP | SAMN05660971_04352 | SAMN05660971_00758 | Small conductance mechanosensitive channel. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.589 |
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