STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2236248N-terminal acetyltransferase A, auxiliary subunit. (67 aa)    
Predicted Functional Partners:
C2G38_2186001
Acyl-CoA N-acyltransferase.
   
 
 0.890
C2G38_2234157
Acyl-CoA N-acyltransferase.
   
 
 0.858
C2G38_2206300
Uncharacterized protein.
    
 
 0.848
C2G38_2270863
WD40-repeat-containing domain protein.
    
   0.759
C2G38_2325693
Spo7-like protein.
    
   0.740
C2G38_1508931
N-acetyltransferase domain-containing protein.
   
 
 0.718
C2G38_1508858
Uncharacterized protein.
   
 
 0.718
C2G38_1975319
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.700
C2G38_2132063
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.652
C2G38_2130941
Ribosomal protein L35.
    
   0.652
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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