STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2130623Aspartic peptidase domain-containing protein; Belongs to the peptidase A1 family. (364 aa)    
Predicted Functional Partners:
C2G38_2148317
Reticulon-like protein.
    
  0.537
C2G38_2226146
Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family.
    
 0.501
C2G38_2043497
Aspartic peptidase domain-containing protein; Belongs to the peptidase A1 family.
  
     0.500
C2G38_2027864
Aspartic peptidase domain-containing protein; Belongs to the peptidase A1 family.
  
     0.484
C2G38_2111750
Uncharacterized protein.
    
 0.425
C2G38_1993670
Uncharacterized protein.
    
  0.424
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.