Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2234379Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
C2G38_2049235
Uncharacterized protein.
   
 
 0.817
C2G38_2251141
DNA-directed RNA polymerase.
    
 
 0.655
C2G38_1973988
Nuclear cap-binding protein subunit 2.
    
 
 0.630
C2G38_2078816
Ribonuclease H-like domain-containing protein.
   
 
 0.621
C2G38_1979297
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.613
C2G38_2255452
AAA domain-containing protein.
   
 
 0.572
C2G38_2209520
Ribonuclease III domain-containing protein.
   
 
 0.571
C2G38_2097821
Ribonuclease III domain-containing protein.
   
 
 0.571
C2G38_2159732
Ribonuclease III domain-containing protein.
   
 
 0.571
C2G38_2150403
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.563
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (30%) [HD]