Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2128604P-loop containing nucleoside triphosphate hydrolase protein. (348 aa)    
Predicted Functional Partners:
C2G38_2172896
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.998
C2G38_2123687
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.995
C2G38_1967981
Replication factor RFC1 C terminal domain-containing protein.
   
0.990
C2G38_2041404
Sister chromatid cohesion protein Dcc1.
   
 0.988
C2G38_2134533
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.987
C2G38_2131295
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.987
C2G38_2046899
Uncharacterized protein.
   
 0.975
C2G38_2075917
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.970
C2G38_1977270
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
   
 0.969
C2G38_2065855
Rad17 cell cycle checkpoint protein.
   
 0.968
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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