Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_20101552OG-FeII_Oxy_2 domain-containing protein. (220 aa)    
Predicted Functional Partners:
C2G38_1963383
Uncharacterized protein.
   
 
 0.863
C2G38_801555
Calponin homology domain-containing protein.
     
  0.633
C2G38_1984139
Calponin homology domain-containing protein.
     
  0.633
C2G38_2035527
Calponin homology domain-containing protein.
     
  0.633
C2G38_2256341
Fe2OG dioxygenase domain-containing protein.
  
   
 0.554
C2G38_1990918
Uncharacterized protein.
     
 0.513
C2G38_1981039
Fe2OG dioxygenase domain-containing protein.
   
  
 0.475
C2G38_327350
PlsC domain-containing protein.
     
  0.463
C2G38_1975615
PlsC domain-containing protein.
     
  0.463
C2G38_2098250
Uncharacterized protein.
     
  0.463
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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