C2G38_1195763 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_1195763

Uncharacterized protein. (596 aa)

Predicted Functional Partners:

C2G38_2074506

0.880

C2G38_1392992

0.843

C2G38_2245785

0.843

C2G38_2087926

0.832

C2G38_1911766

0.746

C2G38_1978952

0.745

C2G38_2137193

0.741

C2G38_2250897

0.723

C2G38_803642

0.708

C2G38_790466

0.692

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1195763	C2G38_1392992	A0A397TSR7	A0A397V647	Uncharacterized protein.	Uncharacterized protein.	0.843
C2G38_1195763	C2G38_1911766	A0A397TSR7	A0A397VT67	Uncharacterized protein.	Uncharacterized protein.	0.746
C2G38_1195763	C2G38_1978952	A0A397TSR7	A0A397UL83	Uncharacterized protein.	Cyclin-like protein; Belongs to the cyclin family.	0.745
C2G38_1195763	C2G38_2074506	A0A397TSR7	A0A397VK24	Uncharacterized protein.	Kinase-like domain-containing protein.	0.880
C2G38_1195763	C2G38_2087926	A0A397TSR7	A0A397V4X7	Uncharacterized protein.	Uncharacterized protein.	0.832
C2G38_1195763	C2G38_2137193	A0A397TSR7	A0A397W3E7	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.741
C2G38_1195763	C2G38_2245785	A0A397TSR7	A0A397V7B2	Uncharacterized protein.	Uncharacterized protein.	0.843
C2G38_1195763	C2G38_2250897	A0A397TSR7	A0A397UN45	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.723
C2G38_1195763	C2G38_790466	A0A397TSR7	A0A397U7R8	Uncharacterized protein.	Serine/threonine-protein kinase.	0.692
C2G38_1195763	C2G38_803642	A0A397TSR7	A0A397U7D4	Uncharacterized protein.	Uncharacterized protein.	0.708
C2G38_1392992	C2G38_1195763	A0A397V647	A0A397TSR7	Uncharacterized protein.	Uncharacterized protein.	0.843
C2G38_1392992	C2G38_1911766	A0A397V647	A0A397VT67	Uncharacterized protein.	Uncharacterized protein.	0.830
C2G38_1392992	C2G38_2074506	A0A397V647	A0A397VK24	Uncharacterized protein.	Kinase-like domain-containing protein.	0.836
C2G38_1392992	C2G38_2137193	A0A397V647	A0A397W3E7	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.732
C2G38_1392992	C2G38_2245785	A0A397V647	A0A397V7B2	Uncharacterized protein.	Uncharacterized protein.	0.968
C2G38_1911766	C2G38_1195763	A0A397VT67	A0A397TSR7	Uncharacterized protein.	Uncharacterized protein.	0.746
C2G38_1911766	C2G38_1392992	A0A397VT67	A0A397V647	Uncharacterized protein.	Uncharacterized protein.	0.830
C2G38_1911766	C2G38_2074506	A0A397VT67	A0A397VK24	Uncharacterized protein.	Kinase-like domain-containing protein.	0.942
C2G38_1911766	C2G38_2087926	A0A397VT67	A0A397V4X7	Uncharacterized protein.	Uncharacterized protein.	0.607
C2G38_1911766	C2G38_2137193	A0A397VT67	A0A397W3E7	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.811