STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1334538Pyridoxal phosphate-dependent transferase. (408 aa)    
Predicted Functional Partners:
C2G38_2195331
Histidine biosynthesis trifunctional protein.
     
 0.791
C2G38_2217484
Tryptophan synthase.
    
 0.773
C2G38_1962178
Pantoate-beta-alanine ligase.
  
 
  0.696
C2G38_2176138
Uncharacterized protein.
  
 
  0.696
C2G38_831883
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
  
  0.684
C2G38_2210125
Succinate-semialdehyde dehydrogenase.
   
 0.682
C2G38_1980757
ATP-NAD kinase-like domain-containing protein.
    
 0.658
C2G38_2192922
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.652
C2G38_2171811
Uncharacterized protein.
   
 0.647
C2G38_1892454
Uncharacterized protein.
   
 0.647
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.