Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2050571Ge1_WD40 domain-containing protein. (1422 aa)    
Predicted Functional Partners:
C2G38_2026447
YjeF N-terminal domain-containing protein.
   
 0.971
C2G38_2039348
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.969
C2G38_788355
Uncharacterized protein.
    
 0.969
C2G38_2256205
Uncharacterized protein.
    
 0.936
C2G38_2133458
Nudix hydrolase domain-containing protein.
    
 0.936
C2G38_940613
Topoisomerase II-associated protein PAT1.
    
 0.933
C2G38_1987820
Putative 5-3 exonuclease.
    
 
 0.791
C2G38_1291956
Putative 5-3 exonuclease.
    
 
 0.791
C2G38_1292045
XRN1_D2_D3 domain-containing protein.
    
 
 0.791
C2G38_1291930
Uncharacterized protein.
    
 
 0.791
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.