Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_925230F-box domain-containing protein. (448 aa)    
Predicted Functional Partners:
C2G38_2225843
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.782
C2G38_772373
Uncharacterized protein.
   
 0.776
C2G38_2245621
Uncharacterized protein.
   
 0.776
C2G38_1976120
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.676
C2G38_2165518
TPR_REGION domain-containing protein.
  
 0.671
C2G38_2245812
Thioredoxin.
   
 0.588
C2G38_2015629
Thioredoxin; Belongs to the thioredoxin family.
   
 0.588
C2G38_2074506
Kinase-like domain-containing protein.
   
  0.580
C2G38_1986863
Pyr_redox_2 domain-containing protein.
  
 
 0.575
C2G38_2247317
Thioredoxin reductase.
  
 
 0.575
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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