Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1994298R3H domain-containing protein. (698 aa)    
Predicted Functional Partners:
C2G38_2203925
Peptidylprolyl isomerase.
    
 
 0.892
C2G38_993425
50S ribosomal protein L30e-like protein.
    
 
 0.845
C2G38_2000617
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.835
C2G38_1993792
HECT domain-containing protein.
    
 0.832
C2G38_1972121
40S ribosomal protein S19-A.
    
   0.832
C2G38_2131701
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
    
   0.820
C2G38_1323971
Ribosomal protein L22e.
    
   0.820
C2G38_2034522
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.809
C2G38_1411486
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
     
  0.800
C2G38_1959031
Ribosomal protein S28e.
   
   0.790
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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