Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_974427Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
C2G38_1128270
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.940
C2G38_1540132
Ribosomal protein L7/L12 C-terminal domain-containing protein.
   
 0.938
C2G38_2219095
Ribosomal protein L49/IMG2.
   
 
 0.935
C2G38_1900926
Uncharacterized protein.
   
 0.934
C2G38_2168128
RIBOSOMAL_L9 domain-containing protein.
   
 0.926
C2G38_1973581
Uncharacterized protein.
   
 0.921
C2G38_2003565
Ribonuclease III domain-containing protein.
   
 0.919
C2G38_2004435
39S mitochondrial ribosomal protein L46-domain-containing protein.
   
  0.918
C2G38_2134278
Translation protein; Belongs to the universal ribosomal protein uL3 family.
   
 0.916
C2G38_2165928
Mitochondrial ribosomal death-associated protein 3-domain-containing protein.
   
 
 0.914
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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