Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_881964Peptidase_M1 domain-containing protein. (83 aa)    
Predicted Functional Partners:
C2G38_2209742
Cytosol aminopeptidase.
   
 0.758
C2G38_666338
Aspartate aminotransferase.
    
 0.747
C2G38_2112214
Aspartate aminotransferase.
    
 0.747
C2G38_2179440
Dihydrolipoyl dehydrogenase.
   
 0.676
C2G38_1985369
M20_dimer domain-containing protein.
    
 0.672
C2G38_2137328
WD40-repeat-containing domain protein.
    
 0.672
C2G38_2250045
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.661
C2G38_2017168
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.661
C2G38_2219958
Cystathionine beta synthase.
     
 0.642
C2G38_2238217
Cysteine synthase-like protein.
     
 0.642
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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