Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_878354Uncharacterized protein. (621 aa)    
Predicted Functional Partners:
C2G38_2219102
Ribosome production factor 2.
   
 
 0.658
C2G38_2031202
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.578
C2G38_1984126
Brix domain-containing protein.
   
    0.561
C2G38_1986257
WD40-repeat-containing domain protein.
   
  
 0.524
C2G38_2000493
Noc2p family-domain-containing protein.
   
  
 0.521
C2G38_2138878
WD40-repeat-containing domain protein.
   
    0.518
C2G38_2133472
Ribosomal protein L5 domain-containing protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.509
C2G38_1976874
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
    0.506
C2G38_2058087
Ribosomal RNA Processing 12 protein.
   
    0.506
C2G38_1974726
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.501
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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