Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1876742Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
C2G38_1454066
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.961
C2G38_2146145
Uncharacterized protein.
   
 
 0.928
C2G38_864227
Yae1_N domain-containing protein.
   
 
 0.928
C2G38_2149236
RNAPII transcription regulator C-terminal-domain-containing protein.
    
 
 0.806
MDE1
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
     
  0.800
C2G38_2001460
E3 ubiquitin-protein ligase PEP5.
    
   0.734
C2G38_2251383
FeS_assembly_P domain-containing protein.
    
 
 0.686
C2G38_1454152
KptA family-domain-containing protein.
    
   0.632
C2G38_2146190
Cytosolic Fe-S cluster assembly factor narfl; Belongs to the NARF family.
      
 0.615
C2G38_2254881
GCV_T domain-containing protein.
      
 0.596
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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