Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2255632CAP domain-containing protein. (233 aa)    
Predicted Functional Partners:
C2G38_600507
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.900
C2G38_2137924
Uncharacterized protein.
   
 0.874
C2G38_49446
TPR_REGION domain-containing protein.
   
 0.856
C2G38_2129049
Nuclear pore protein.
    
 0.848
C2G38_2131965
WD40-repeat-containing domain protein.
    
 0.848
C2G38_2176027
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.826
C2G38_2119647
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.813
C2G38_2110749
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.804
C2G38_2214065
Nucleoporin complex subunit 54-domain-containing protein.
    
 0.804
C2G38_2031300
Smg-4/UPF3 family-domain-containing protein.
    
  0.758
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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