Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2292812Uncharacterized protein. (199 aa)    
Predicted Functional Partners:
C2G38_461214
Uncharacterized protein.
   
  0.765
C2G38_2217484
Tryptophan synthase.
     
  0.730
C2G38_704198
Uncharacterized protein.
   
 0.725
C2G38_2079153
Uncharacterized protein.
   
 0.725
C2G38_1972034
SET domain-containing protein.
     
 0.678
C2G38_171189
Uncharacterized protein.
    
  0.675
C2G38_2077082
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
  0.669
C2G38_2242581
Uncharacterized protein.
     
  0.669
C2G38_1973597
P-loop containing nucleoside triphosphate hydrolase protein.
     
  0.644
C2G38_1732821
SET domain-containing protein.
    
  0.600
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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