Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2127553Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
C2G38_2296304
AAA_12 domain-containing protein.
 
     0.599
C2G38_1013271
Uncharacterized protein.
 
     0.566
C2G38_2010707
Type II pantothenate kinase.
     
  0.564
C2G38_2007517
Uncharacterized protein.
    
 
 0.523
C2G38_2209864
PAP-associated domain-containing protein.
    
 
 0.523
C2G38_1967055
Uncharacterized protein.
    
 
 0.523
C2G38_2130706
Uncharacterized protein.
  
     0.516
C2G38_2049770
Uncharacterized protein.
 
     0.495
C2G38_1987184
Piwi domain-containing protein; Belongs to the argonaute family.
    
 
 0.493
C2G38_2205509
Piwi domain-containing protein; Belongs to the argonaute family.
    
 
 0.493
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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