STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2230297Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
C2G38_2050534
Chromosome segregation 1-like protein.
   
 0.898
C2G38_2197950
Armadillo-type protein.
   
 0.848
C2G38_1891060
Uncharacterized protein.
   
 0.848
C2G38_2078712
MIF4G like-domain-containing protein.
    
 
 0.722
C2G38_49446
TPR_REGION domain-containing protein.
   
 
 0.714
C2G38_1973988
Nuclear cap-binding protein subunit 2.
    
 
 0.711
C2G38_2133082
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.701
C2G38_2078816
Ribonuclease H-like domain-containing protein.
    
   0.701
C2G38_2139033
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.701
C2G38_1873245
RanBP1 domain-containing protein.
   
 
 0.697
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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