STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2226496Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (365 aa)    
Predicted Functional Partners:
C2G38_2220347
Putative saccharopine reductase.
  
 
 0.861
C2G38_1953877
Saccharopine dehydrogenase.
  
 
 0.854
C2G38_1681569
Monofunctional lysine-ketoglutarate reductase 2.
   
 
0.812
C2G38_1985648
Pyridoxal-dependent decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.777
C2G38_2221562
Alpha-aminoadipate reductase Lys1p.
 
 
 0.769
C2G38_2149148
Uncharacterized protein.
   
 
 0.678
C2G38_1999673
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.661
C2G38_1978866
Aspartate-semialdehyde dehydrogenase.
   
 
  0.658
C2G38_2252513
Arginase; Belongs to the arginase family.
    
 0.649
C2G38_1998593
Arginase; Belongs to the arginase family.
    
 0.649
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.