STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2124131Peptide hydrolase; Belongs to the peptidase M28 family. (388 aa)    
Predicted Functional Partners:
C2G38_2209742
Cytosol aminopeptidase.
     
 0.754
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
     
 0.657
C2G38_2016676
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.653
C2G38_2033147
Proteasome regulatory subunit C-terminal-domain-containing protein.
     
 0.647
C2G38_2140917
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.646
C2G38_428257
Uncharacterized protein.
    
 0.640
C2G38_1951565
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
   
 
  0.639
C2G38_1921168
HECT domain-containing protein.
    
  0.632
C2G38_512423
Uncharacterized protein.
    
  0.632
C2G38_2132034
E3 ubiquitin-protein ligase.
    
  0.632
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.