STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2124131Peptide hydrolase; Belongs to the peptidase M28 family. (388 aa)    
Predicted Functional Partners:
C2G38_2232726
Uncharacterized protein.
     
 0.802
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
     
 0.802
C2G38_2145149
Adenosine kinase.
     
  0.786
C2G38_2191734
ANK_REP_REGION domain-containing protein.
     
  0.786
C2G38_1976258
Potassium channel regulatory factor.
    
   0.765
C2G38_1979451
Uncharacterized protein.
    
 
 0.732
C2G38_2197869
Uncharacterized protein.
    
 0.682
C2G38_2224869
N-acetyltransferase domain-containing protein.
     
  0.669
C2G38_2182641
Putative acyltransfersase.
     
  0.669
C2G38_2175589
Uncharacterized protein.
     
  0.669
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.