STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2226530Chitin synthase; Plays a major role in cell wall biogenesis. (75 aa)    
Predicted Functional Partners:
C2G38_2210327
Acetolactate synthase.
   
 0.755
C2G38_703559
SH3 domain-containing protein.
   
 
 0.642
C2G38_703493
F-BAR domain-containing protein.
   
 
 0.642
C2G38_2033238
Ilv6 regulatory subunit of acetolacetate synthase.
   
 0.630
C2G38_2309973
Uncharacterized protein.
   
 0.587
C2G38_1339915
Uncharacterized protein.
   
 0.587
C2G38_2016274
Dihydroxy-acid dehydratase.
   
 0.587
C2G38_1952560
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain-containing protein; Belongs to the TPP enzyme family.
   
 0.581
C2G38_1983658
C2 domain-containing protein.
    
 
 0.520
C2G38_1983748
UDP-glucose 6-dehydrogenase.
  
 
 0.507
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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