STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2133525SacI homology domain-containing protein. (881 aa)    
Predicted Functional Partners:
C2G38_2250982
Vacuolar protein 14 C-terminal Fig4p binding-domain-containing protein.
   
 0.968
C2G38_2051013
Uncharacterized protein.
    
 0.944
C2G38_1766436
Uncharacterized protein.
    
 0.944
C2G38_2038203
PIPK domain-containing protein.
    
 0.944
C2G38_1976877
Mitochondrial import protein Pam17.
    
 0.920
C2G38_2042869
Protein-tyrosine phosphatase-like protein.
     
 0.876
C2G38_1989802
Phosphatidylinositol 3-kinase VPS34.
   
 
 0.875
C2G38_2099658
WD40-repeat-containing domain protein.
    
 
 0.802
C2G38_2146298
Protein-tyrosine phosphatase-like protein.
     
 0.792
C2G38_2178966
Protein-tyrosine phosphatase-like protein.
     
 0.792
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.