STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2025051Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (411 aa)    
Predicted Functional Partners:
C2G38_770948
WD40-repeat-containing domain protein.
   
 0.998
C2G38_2003874
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.997
C2G38_2105019
SHNi-TPR domain-containing protein.
   
 
 0.991
C2G38_1673467
Uncharacterized protein.
   
 0.983
C2G38_958340
Origin recognition complex subunit 3 N-terminus-domain-containing protein.
   
 
 0.977
C2G38_2088247
Origin recognition complex subunit 5 C-terminus-domain-containing protein.
    
 
 0.976
C2G38_2207540
Origin recognition complex subunit 4 C-terminus-domain-containing protein.
    
 
 0.972
C2G38_2008081
Histone-fold-containing protein.
    
 0.949
C2G38_1974740
Histone H3; Belongs to the histone H3 family.
    
 0.949
C2G38_2037077
Histone H3; Belongs to the histone H3 family.
    
 0.949
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.