STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2230852P-loop containing nucleoside triphosphate hydrolase protein. (767 aa)    
Predicted Functional Partners:
C2G38_1044269
ABC transporter type 1, transmembrane domain-containing protein.
 
     0.800
C2G38_981866
ABC transporter type 1, transmembrane domain-containing protein.
 
     0.678
C2G38_1043810
ABC transporter type 1, transmembrane domain-containing protein.
 
     0.675
C2G38_35960
Acetyl-CoA carboxylase.
   
 0.673
C2G38_2085137
ANTH-domain-containing protein.
    
 0.640
C2G38_2094252
Metalloenzyme, LuxS/M16 peptidase-like protein; Belongs to the peptidase M16 family.
    
  0.624
C2G38_1976276
Metalloenzyme, LuxS/M16 peptidase-like protein.
    
  0.590
C2G38_787886
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
  0.581
C2G38_2132823
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.577
C2G38_1877775
26S proteasome non-ATPase regulatory subunit 14.
    
  0.562
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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