STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2135898ADP-ribosylation factor family-domain-containing protein; Belongs to the small GTPase superfamily. Arf family. (172 aa)    
Predicted Functional Partners:
C2G38_2120856
Ras family-domain-containing protein.
   
 0.981
C2G38_2024331
t-SNARE; Belongs to the syntaxin family.
    
 0.962
C2G38_2071390
Dor1-like family-domain-containing protein.
    
 0.947
C2G38_2206848
SEC7 domain-containing protein.
    
 0.941
C2G38_428257
Uncharacterized protein.
    
 0.940
C2G38_1986119
KH domain-containing protein.
    
 0.937
C2G38_1429789
Arf-GAP domain-containing protein.
    
 0.934
C2G38_1973321
Vps53-like protein.
    
 0.931
C2G38_2091959
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.929
C2G38_1970938
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.929
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (24%) [HD]