STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2126645WD_REPEATS_REGION domain-containing protein. (90 aa)    
Predicted Functional Partners:
C2G38_2221055
WD_REPEATS_REGION domain-containing protein.
    
 0.950
C2G38_2110749
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.950
C2G38_2191118
Nitrogen permease regulator of amino acid transport activity 3-domain-containing protein.
    
 0.950
C2G38_1966828
Nitrogen permease regulator 2-domain-containing protein.
   
 0.950
C2G38_2247793
DEP domain-containing protein.
    
 0.949
C2G38_2199878
WD40-repeat-containing domain protein.
   
 0.943
C2G38_600507
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.941
C2G38_2176027
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.938
C2G38_573612
Zinc_ribbon_16 domain-containing protein.
    
 0.896
C2G38_49446
TPR_REGION domain-containing protein.
    
 0.881
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.