Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1889924Endonuclease/exonuclease/phosphatase. (719 aa)    
Predicted Functional Partners:
C2G38_2002399
WD40-repeat-containing domain protein.
    
   0.891
C2G38_2123869
SacI homology domain-containing protein.
    
 0.819
C2G38_1989038
Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.
     
 0.775
C2G38_1952471
PIPK domain-containing protein.
  
  
 0.774
C2G38_2116078
Phosphatidylinositol 3 and 4-kinase-domain-containing protein.
     
 0.752
C2G38_1988847
WD40-repeat-containing domain protein.
 
 
    0.729
C2G38_1185676
Uncharacterized protein.
     
 0.697
C2G38_1963764
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.697
C2G38_2085352
SH3 domain-containing protein.
    
 0.696
C2G38_1429789
Arf-GAP domain-containing protein.
    
  0.691
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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