STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1990540Tctex-1 family-domain-containing protein. (112 aa)    
Predicted Functional Partners:
C2G38_2007486
Dynein light chain roadblock.
  
 0.935
C2G38_1967350
Tctex-1.
    
 
 0.900
C2G38_2131876
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
 0.871
C2G38_2192661
WD40-repeat-containing domain protein.
    
 0.869
C2G38_2187203
WD40-repeat-containing domain protein.
    
 0.869
C2G38_1963843
WD40-repeat-containing domain protein.
    
 0.869
C2G38_1974219
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
 0.865
C2G38_1983427
Dynein heavy chain.
    
 0.711
C2G38_2019423
Dynein heavy chain and region D6 of dynein motor-domain-containing protein.
    
 0.711
C2G38_2018057
Dynein heavy chain and region D6 of dynein motor-domain-containing protein.
    
 0.711
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.