STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_817162Signal recognition particle, SRP19 subunit. (217 aa)    
Predicted Functional Partners:
C2G38_2222769
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.999
C2G38_1974930
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.999
C2G38_2028391
Signal recognition particle, SRP9/SRP14 subunit.
   
 0.999
C2G38_2221299
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 0.998
C2G38_183024
Signal recognition particle, SRP9/SRP14 subunit.
   
 0.998
C2G38_2144272
Signal recognition particle receptor beta subunit-domain-containing protein.
   
 
 0.958
C2G38_2132063
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.953
C2G38_2224309
60S ribosomal protein L14e.
   
  0.948
C2G38_1965228
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
  0.947
C2G38_1972423
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
  0.944
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.