STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2135973PdxT/SNO family. (213 aa)    
Predicted Functional Partners:
C2G38_2164857
Vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family.
 
 0.999
C2G38_1964513
SGNH hydrolase.
  
 0.998
C2G38_2026447
YjeF N-terminal domain-containing protein.
    
 0.869
C2G38_2248561
HAD-like domain-containing protein.
    
 0.857
C2G38_2133540
Class I glutamine amidotransferase-like protein.
    
 0.856
C2G38_2011989
Uncharacterized protein.
    
 0.847
C2G38_2120404
Pyridoxamine 5'-phosphate oxidase-domain-containing protein.
     
 0.815
C2G38_1963618
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
 
 0.810
C2G38_1993150
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.797
C2G38_2221941
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.773
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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