Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2126072P-loop containing nucleoside triphosphate hydrolase protein. (1088 aa)    
Predicted Functional Partners:
C2G38_2252078
Uncharacterized protein.
  
 
 0.969
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.962
C2G38_2002247
RL10P_insert domain-containing protein.
  
 0.874
C2G38_2086777
Ribosomal protein S11-domain-containing protein; Belongs to the universal ribosomal protein uS11 family.
  
 0.867
C2G38_1951364
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.858
C2G38_1700369
Ribosomal protein L24e.
   
 0.856
C2G38_272305
Ribosome recycling factor domain-containing protein.
  
 
 0.855
C2G38_772373
Uncharacterized protein.
   
 
 0.854
C2G38_2245621
Uncharacterized protein.
   
 
 0.854
C2G38_2272102
Eukaryotic translation initiation factor 5A.
  
 
 0.850
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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