Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2255057RNB domain-containing protein. (865 aa)    
Predicted Functional Partners:
C2G38_1968095
S1 motif domain-containing protein.
   
 0.965
C2G38_2078816
Ribonuclease H-like domain-containing protein.
   
 0.965
C2G38_2096056
Ribosomal protein S5 domain 2-type protein.
   
 0.963
C2G38_2047320
Ribosomal protein S5 domain 2-type protein.
   
 0.955
C2G38_2118150
Ribosomal protein S5 domain 2-type protein.
   
 0.954
C2G38_2003927
Ribosomal protein S5 domain 2-type protein.
   
 0.952
C2G38_2158493
Exosome complex exonuclease RRP43.
   
 0.952
C2G38_2019741
KH_dom_type_1 domain-containing protein.
   
 0.950
C2G38_1955542
Uncharacterized protein.
    
 0.950
C2G38_2245936
Uncharacterized protein.
   
 0.949
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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