Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2050118Superoxide dismutase. (136 aa)    
Predicted Functional Partners:
C2G38_1969109
Superoxide dismutase.
   
 0.946
C2G38_1988931
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.858
C2G38_2102393
Manganese/iron superoxide dismutase.
   
 0.858
C2G38_1984462
DJ-1 family protein.
   
 0.846
C2G38_2036698
ThiJ/PfpI domain-containing protein.
   
 0.846
C2G38_2230859
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.843
C2G38_2225843
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.800
C2G38_1991759
VWFA domain-containing protein.
   
  0.771
C2G38_2045129
Uncharacterized protein.
   
 0.762
C2G38_2091493
Uncharacterized protein.
   
 0.762
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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