STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
C2G38_2234850Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. (397 aa)    
Predicted Functional Partners:
C2G38_1992046
Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]
  
0.993
C2G38_1978006
Uncharacterized protein.
  
 
  0.655
C2G38_2031555
Tetrahydrofolate dehydrogenase/cyclohydrolase.
  
 
  0.655
C2G38_2005545
6-pyruvoyl tetrahydrobiopterin synthase.
    
 0.621
C2G38_1770584
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
    
  0.612
C2G38_2133078
Thymidylate kinase-domain-containing protein.
  
 
 0.597
C2G38_1954381
Thymidylate kinase-domain-containing protein.
  
 
 0.597
C2G38_2158640
Putative thymidylate kinase.
  
 
 0.597
C2G38_2250045
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.596
C2G38_2017168
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
  0.596
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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