Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2122949Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
C2G38_1950144
DNA damage-binding protein 1a-like protein.
   
 0.960
C2G38_2075897
WD40-repeat-containing domain protein.
    
 0.935
C2G38_2228331
RING-type domain-containing protein.
    
 0.934
C2G38_2208216
PCI domain-containing protein.
    
 0.926
C2G38_2242177
COP9 signalosome complex subunit 6A.
    
 0.918
C2G38_2231447
COP9 signalosome.
    
 0.910
C2G38_2137170
26S proteasome subunit RPN7-domain-containing protein.
   
 0.910
C2G38_1987904
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
 0.909
C2G38_182778
WD40-repeat-containing domain protein.
    
 0.902
C2G38_1980704
PCI domain-containing protein.
   
 0.889
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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