Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2010317Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
C2G38_2179582
Anaphase promoting complex subunit 8.
   
 0.913
C2G38_2200490
Anaphase-promoting complex subunit 5-domain-containing protein.
   
 0.907
C2G38_2202672
TPR_REGION domain-containing protein.
   
 0.895
C2G38_1453833
Anaphase-promoting complex, cyclosome, subunit 4-domain-containing protein.
   
 0.886
C2G38_2033676
APC1_C domain-containing protein.
   
 0.886
C2G38_2178293
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.876
C2G38_2078955
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.864
C2G38_2132731
WD40-repeat-containing domain protein.
   
 0.845
C2G38_1973400
WD40-repeat-containing domain protein.
   
 0.845
C2G38_2075868
WD40-repeat-containing domain protein.
   
 0.845
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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