Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C2G38_2133456Fibrillarin-domain-containing protein. (312 aa)    
Predicted Functional Partners:
C2G38_2008666
Nop domain-containing protein.
   
 0.999
C2G38_2131708
Nop domain-containing protein.
   
 0.999
C2G38_2049696
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.998
C2G38_2048343
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.998
C2G38_288634
Pseudouridine synthase.
   
 0.997
C2G38_2194506
WD40-repeat-containing domain protein.
   
 0.997
C2G38_2131992
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.997
C2G38_2222685
U3 small nucleolar RNA-associated protein 22.
   
 0.995
C2G38_2248937
Uncharacterized protein.
   
 0.994
C2G38_1967892
SRP40, C-terminal domain-containing protein.
   
 
 0.992
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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