Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2254881GCV_T domain-containing protein. (369 aa)    
Predicted Functional Partners:
C2G38_2092320
PID domain-containing protein.
  
 
 0.965
C2G38_2133458
Nudix hydrolase domain-containing protein.
 
      0.886
C2G38_2023705
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
     
 0.872
C2G38_2131958
Pumilio 2.
    
   0.870
C2G38_2183032
Fe-S_biosyn domain-containing protein.
   
 
 0.840
C2G38_1770584
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.832
C2G38_2199381
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.817
C2G38_2150473
Uncharacterized protein.
  
 
 0.800
C2G38_2223848
Uncharacterized protein.
  
 
 0.800
C2G38_2255407
Uncharacterized protein.
  
 
 0.800
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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