Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_212221340S ribosomal protein S22-A; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
C2G38_2122194
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
C2G38_2006925
Plectin/S10 domain-containing protein.
   
 0.999
C2G38_394958
Ribosomal protein S17-domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.999
C2G38_2044066
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
C2G38_1982663
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
C2G38_1976355
Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
C2G38_1975284
S4 RNA-binding domain-containing protein.
  
 0.999
C2G38_1975166
Ribosomal protein rps20.
  
 0.999
C2G38_2132100
40S ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
C2G38_1972121
40S ribosomal protein S19-A.
   
 0.999
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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