Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2051512PPR_long domain-containing protein. (309 aa)    
Predicted Functional Partners:
C2G38_1969461
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.866
C2G38_2194496
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.841
C2G38_2131958
Pumilio 2.
    
   0.819
C2G38_2087888
30S ribosomal protein S17.
   
 
 0.812
C2G38_1986308
30S ribosomal protein S8.
   
   0.809
C2G38_1975197
S4 RNA-binding domain-containing protein.
    
 
 0.807
C2G38_1981675
Mitochondrial ribosomal protein S25.
    
   0.803
C2G38_1993707
30S ribosomal protein S6.
    
 
 0.740
C2G38_2232203
Spindle pole body component.
    
 0.703
C2G38_2129134
Spindle pole body component.
    
  0.701
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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