Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C2G38_2150730Cir_N domain-containing protein. (300 aa)    
Predicted Functional Partners:
C2G38_2250200
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.900
C2G38_2009348
Peptidyl-prolyl cis-trans isomerase.
   
 0.876
C2G38_1975849
Cell cycle control protein cwf14.
    
 0.873
C2G38_2198491
GC-rich sequence DNA-binding factor-like protein.
    
  0.862
C2G38_2029929
Folate-sensitive fragile site protein Fra10Ac1-domain-containing protein.
    
   0.839
C2G38_2047672
SYF2 splicing factor-domain-containing protein.
    
 0.834
C2G38_1997931
Armadillo-type protein.
    
 0.827
C2G38_1891990
mRNA splicing factor.
    
  0.826
C2G38_2133732
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.822
C2G38_2174300
Peptidyl-prolyl cis-trans isomerase D.
    
 0.822
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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