Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2149216Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
C2G38_1983077
Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24.
    
 0.697
C2G38_2131682
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.683
C2G38_1915047
Tim10/DDP family zinc finger-domain-containing protein.
    
 0.585
C2G38_1968919
Tim10/DDP family zinc finger protein.
   
 
 0.553
C2G38_1964114
Tim17/Tim22/Tim23/Pmp24 family-domain-containing protein.
    
 0.505
C2G38_2243568
Uncharacterized protein.
    
 0.463
C2G38_2144408
Uncharacterized protein.
     
 0.431
C2G38_1994294
Homeobox domain-containing protein.
    
  0.415
C2G38_2230065
Homeobox domain-containing protein.
    
  0.415
C2G38_1989621
Homeobox domain-containing protein.
    
  0.415
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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