Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C2G38_2048714Myb_DNA-bind_7 domain-containing protein. (364 aa)    
Predicted Functional Partners:
C2G38_2226184
Brf1-like TBP-binding domain-containing protein.
    
 0.994
C2G38_2131086
TATA-box binding protein.
    
 0.994
C2G38_2253709
Uncharacterized protein.
   
 0.987
C2G38_2135992
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.983
C2G38_2049022
RNA polymerase Rpc34.
    
 0.983
C2G38_2042709
RNA polymerase Rpb4-domain-containing protein.
    
 0.982
C2G38_694832
RNA polymerase III RPC4-domain-containing protein.
    
 0.973
C2G38_488992
Sin-like protein conserved region-domain-containing protein.
    
 0.973
C2G38_1989258
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.969
C2G38_2201028
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
    
 0.967
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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