Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2223398Armadillo-type protein. (942 aa)    
Predicted Functional Partners:
C2G38_2111014
Armadillo-type protein.
   
 0.968
C2G38_2038958
Uncharacterized protein.
   
 
 0.961
C2G38_2122393
Putative nonsense-mediated mRNA decay protein.
   
 
 0.951
C2G38_2059979
Armadillo-type protein.
   
 
 0.949
C2G38_2251380
Armadillo-type protein.
   
 
 0.940
C2G38_2111283
Armadillo-type protein.
     
 0.931
C2G38_2098540
Armadillo-type protein.
   
 
 0.931
C2G38_2197950
Armadillo-type protein.
   
 
 0.930
C2G38_1891060
Uncharacterized protein.
   
 
 0.930
C2G38_2248672
Armadillo-type protein.
   
 
 0.925
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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