Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2008883Uncharacterized protein. (424 aa)    
Predicted Functional Partners:
C2G38_1977301
Small subunit of carbamoyl-phosphate synthase.
     
  0.775
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
   0.730
C2G38_2009166
SET domain-containing protein.
    
 0.720
C2G38_2101279
Methylmalonyl-coenzyme A mutase-like protein.
    
 0.720
C2G38_2185896
SET domain-containing protein.
    
 0.720
C2G38_1962537
Uncharacterized protein.
    
 0.720
C2G38_2156699
SET domain-containing protein.
    
 0.720
C2G38_1982446
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
     
  0.718
C2G38_2091169
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
     
  0.718
C2G38_1981232
Beta-hexosaminidase.
     
 0.678
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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