Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2049666GATA-type domain-containing protein. (506 aa)    
Predicted Functional Partners:
C2G38_2098127
Putative brg-1 associated factor.
   
 0.994
C2G38_2132695
Actin family; Belongs to the actin family.
   
 0.992
C2G38_2007116
Uncharacterized protein.
   
 0.989
C2G38_1960902
Uncharacterized protein.
   
 0.984
C2G38_2219340
Uncharacterized protein.
   
 0.982
C2G38_1987691
Bromodomain-containing protein.
   
 0.963
C2G38_1946531
BZIP domain-containing protein.
    
 0.952
C2G38_798485
DEK_C domain-containing protein.
   
 0.949
C2G38_2081650
Histone H2A; Belongs to the histone H2A family.
   
 0.940
C2G38_2046370
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.937
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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