STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2223052Potassium transporter 20. (733 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.867
C2G38_2037791
WD40-repeat-containing domain protein.
   
 0.857
C2G38_196656
Ipi1_N domain-containing protein.
   
 0.848
C2G38_2229806
Protein kinase domain-containing protein.
    
  0.784
C2G38_2189219
Kinase-like domain-containing protein.
    
  0.784
C2G38_2242857
Protein kinase domain-containing protein.
    
  0.784
C2G38_2131241
Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
  0.774
C2G38_2040620
Uncharacterized protein.
    
 0.773
C2G38_2131912
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.773
C2G38_2086777
Ribosomal protein S11-domain-containing protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.773
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.