Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_807592Uncharacterized protein. (710 aa)    
Predicted Functional Partners:
C2G38_2232613
GATA-type domain-containing protein.
    
 
 0.963
C2G38_2131360
SNF2 family N-terminal domain-containing protein.
   
 
 0.947
C2G38_2098127
Putative brg-1 associated factor.
   
 
 0.944
C2G38_2219340
Uncharacterized protein.
    
 
 0.940
C2G38_2091903
Chromatin remodelling complex Rsc7/Swp82 subunit-domain-containing protein.
    
 
 0.937
C2G38_714288
Sds3-like-domain-containing protein.
    
 0.915
C2G38_2049666
GATA-type domain-containing protein.
    
 
 0.910
C2G38_2133598
SNF2 family N-terminal domain-containing protein.
   
 
 0.907
C2G38_2038149
Yeats family-domain-containing protein.
    
 
 0.898
C2G38_2007116
Uncharacterized protein.
   
 
 0.877
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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